Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_6_17712736_17712976_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17712736 - 17712976

Intron Length:

241

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAGGG

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTGTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCCCAT

U12 Branch Point Sequence:

TGCACCTGACGC

Flanking Amino Acid:

SHDRRLRAAQVTIEAQGMES

Intron Amino Acid Position:

663

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

65.9

40.1

Major BPS

59.7

0.24

1.3

68.6

38.9

Major PPT

78.5

0.64

0.9

76.8

37.4

Minor 5ss

24.4

-2.9

3.1

29.4

43.3

Minor BPS

-0.4

52.57

44.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004184

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004321

17705985 - 17714176

8192