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Intron Name: Anas_platyrhynchos_platyrhynchos_6_17719420_17719498_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17719420 - 17719498

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGCAGG

5'SS Class:

major

3'SS Sequence:

TCCGGGCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCAGAC

U12 Branch Point Sequence:

GCAGACTGAGTT

Flanking Amino Acid:

CWNPTLSRVEVLQHLGEDTL

Intron Amino Acid Position:

148

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

1.1

63.6

48.1

Major BPS

49.6

-0

1.1

46.4

38.9

Major PPT

61.7

0.26

0.9

53.5

36.7

Minor 5ss

37.4

-1.4

3.1

48.3

47.5

Minor BPS

41.6

-0.5

1.8

51.51

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005129

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005296

17718214 - 17720035

1822