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Intron Name: Anas_platyrhynchos_platyrhynchos_6_17729211_17729343_R


Intron Information:

Intron Rank:
7

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
17729211 - 17729343

Intron Length:
133

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CGT|GTAGGTGAC

5'SS Class:
major

3'SS Sequence:
CTTTTTCCAACAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TGGGAAA

U12 Branch Point Sequence:
CTTTTTCCAACA

Flanking Amino Acid:
AFVVAHETGHVLGMEHDGQG

Intron Amino Acid Position:
395

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
64.3
0.34
1.2
59.7
39.9

Major BPS
44.1
-0.3
1.5
47.4
44.6

Major PPT
81.4
0.71
0.8
77.8
29.6

Minor 5ss
33.6
-1.9
3.5
43.2
44.5

Minor BPS
50.3
0
1.9
67.52
39.2

Associated Gene:

Gene:
ADAMTS14

Ensembl Gene ID:

Chromosome:
6

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

17709662 - 17743573
33912