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Intron Name: Anas_platyrhynchos_platyrhynchos_6_17729450_17731515_R


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
17729450 - 17731515

Intron Length:
2066

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTACTGTAT

5'SS Class:
major

3'SS Sequence:
TCTCTCTCTCCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TCCTCCT

U12 Branch Point Sequence:
CTCTCCTTCCTC

Flanking Amino Acid:
RQDFGPAGMQGYAPVTGMCH

Intron Amino Acid Position:
360

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
71.8
0.51
1.1
68.7
38.6

Major BPS
32.6
-1
4.2
67.6
40.6

Major PPT
85
0.79
0.7
77
31.7

Minor 5ss
37.4
-1.4
3.5
55.6
48.6

Minor BPS
41.3
-0.6
3.6
61.11
45.2

Associated Gene:

Gene:
ADAMTS14

Ensembl Gene ID:

Chromosome:
6

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

17709662 - 17743573
33912