Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_6_17752101_17752178_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17752101 - 17752178

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCGCCC

5'SS Class:

major

3'SS Sequence:

TCGCCCTCGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTAAAT

U12 Branch Point Sequence:

CCCTCCTTAAAT

Flanking Amino Acid:

IPDFCAPKEQDFDRLLEAMK

Intron Amino Acid Position:

633

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.3

0.34

1.3

41.7

Major BPS

0.5

1.1

76.9

32.8

Major PPT

65.8

0.36

61.5

34.9

Minor 5ss

36.5

-1.5

3.5

51.8

44.9

Minor BPS

70.5

0.72

1.5

76.73

45.7

Associated Gene:

Gene:

PALD1

Ensembl Gene ID:

ENSAPLG00000006275

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006519

17748755 - 17757937

9183

ENSAPLT00000022861

17748755 - 17757937

9183