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Intron Name: Anas_platyrhynchos_platyrhynchos_6_17752377_17753000_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17752377 - 17753000

Intron Length:

624

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCCTG

5'SS Class:

strong_major

3'SS Sequence:

CCATCCTCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGTGAA

U12 Branch Point Sequence:

GGCTCCTCCATC

Flanking Amino Acid:

VPASTPEQLEKLEAALKGDL

Intron Amino Acid Position:

567

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

68.8

43.8

Major BPS

56.9

0.17

1.3

49.1

46.3

Major PPT

75.7

0.58

0.8

69.2

31.1

Minor 5ss

-1.6

3.2

46.7

48.6

Minor BPS

47.5

-0.2

42.6

Associated Gene:

Gene:

PALD1

Ensembl Gene ID:

ENSAPLG00000006275

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022861

17748755 - 17757937

9183

ENSAPLT00000006519

17748755 - 17757937

9183