Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_6_17753181_17753259_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17753181 - 17753259

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGAGC

5'SS Class:

strong_major

3'SS Sequence:

CGCTTTCCCCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAA

U12 Branch Point Sequence:

GTCCCCTCACCA

Flanking Amino Acid:

IYGTAQPSSKTLGSVLRYLT

Intron Amino Acid Position:

507

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

38.2

Major BPS

60.8

0.27

1.1

63.2

34.1

Major PPT

69.5

0.44

0.8

61.8

34.9

Minor 5ss

27.2

-2.6

33.9

41.8

Minor BPS

49.5

-0

1.9

62.01

43.8

Associated Gene:

Gene:

PALD1

Ensembl Gene ID:

ENSAPLG00000006275

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022861

17748755 - 17757937

9183

ENSAPLT00000006519

17748755 - 17757937

9183