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Intron Name: Anas_platyrhynchos_platyrhynchos_6_17755878_17755956_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

17755878 - 17755956

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCGGG

5'SS Class:

strong_major

3'SS Sequence:

CTCCCCATGCAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCCCCAT

U12 Branch Point Sequence:

GCTCCGCTGACC

Flanking Amino Acid:

VPKGQQMVEEVDSAIASCSE

Intron Amino Acid Position:

401

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

0.9

67.1

44.6

Major BPS

59.7

0.24

1.3

68.6

38.9

Major PPT

53.8

0.09

1.1

52.6

35.7

Minor 5ss

35.7

-1.6

3.3

46.8

48.5

Minor BPS

44.3

-0.4

2.3

41.6

Associated Gene:

Gene:

PALD1

Ensembl Gene ID:

ENSAPLG00000006275

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022861

17748755 - 17757937

9183

ENSAPLT00000006519

17748755 - 17757937

9183