Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_6_17756054_17756148_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17756054 - 17756148

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGA|GTAAGCAGG

5'SS Class:

major

3'SS Sequence:

TCCCCGTGGGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

CTTTCTTTAATT

Flanking Amino Acid:

LHHRGATQKPDPQPPAKTSP

Intron Amino Acid Position:

368

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.2

0.43

1.1

57.3

47.4

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

0.23

1.1

56.3

38.8

Minor 5ss

40.1

-1.1

2.8

45.3

43.6

Minor BPS

83.7

1.13

91.31

32.6

Associated Gene:

Gene:

PALD1

Ensembl Gene ID:

ENSAPLG00000006275

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022861

17748755 - 17757937

9183

ENSAPLT00000006519

17748755 - 17757937

9183