Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_6_17756298_17756389_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17756298 - 17756389

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGGCGG

5'SS Class:

major

3'SS Sequence:

CCTTTCCTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTCAC

U12 Branch Point Sequence:

CTTTCTGCAGCT

Flanking Amino Acid:

HFDAFIRFLRESPGLLLRDP

Intron Amino Acid Position:

319

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.9

0.52

1.1

51.3

46.9

Major BPS

52.1

0.05

1.3

41.8

Major PPT

76.6

0.6

0.7

69.3

31.3

Minor 5ss

24.3

-3

21.2

37.4

Minor BPS

-0.2

2.3

71.65

45.6

Associated Gene:

Gene:

PALD1

Ensembl Gene ID:

ENSAPLG00000006275

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006519

17748755 - 17757937

9183

ENSAPLT00000022861

17748755 - 17757937

9183