Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_6_17756956_17757171_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17756956 - 17757171

Intron Length:

216

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTGGTGCG

5'SS Class:

major

3'SS Sequence:

GCTGTCTTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAT

U12 Branch Point Sequence:

CCATCCCTGACA

Flanking Amino Acid:

LQKLQREGHKECVFFCVREE

Intron Amino Acid Position:

185

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.8

0.51

1.2

61.8

Major BPS

0.5

1.1

71.2

35.2

Major PPT

78.6

0.64

0.9

41.9

Minor 5ss

-2.5

3.1

32.9

42.1

Minor BPS

56.8

0.21

1.7

63.87

42.4

Associated Gene:

Gene:

PALD1

Ensembl Gene ID:

ENSAPLG00000006275

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022861

17748755 - 17757937

9183

ENSAPLT00000006519

17748755 - 17757937

9183