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Intron Name: Anas_platyrhynchos_platyrhynchos_6_17793093_17793810_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17793093 - 17793810

Intron Length:

718

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTGAGTTCA

5'SS Class:

strong_major

3'SS Sequence:

TTTCCAATGACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTCAT

U12 Branch Point Sequence:

TTTCCAATGACA

Flanking Amino Acid:

CSREGIDCCTIYSTPVGYDK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

75.8

28.9

Major BPS

77.2

0.67

1.2

79.6

35.6

Major PPT

0.47

66.3

38.6

Minor 5ss

37.5

-1.4

2.8

46.1

42.2

Minor BPS

54.8

0.15

1.9

74.92

35.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018946

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047561

17789468 - 17794306

4839

ENSAPLT00000040232

17782554 - 17794306

11753