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Intron Name: Anas_platyrhynchos_platyrhynchos_6_17847337_17849192_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17847337 - 17849192

Intron Length:

1856

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGAAGC

5'SS Class:

strong_major

3'SS Sequence:

GTGTTTCAAACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTCAA

U12 Branch Point Sequence:

TGTGTTTCAAAC

Flanking Amino Acid:

CTRSATHLMKVFEEYQKLAG

Intron Amino Acid Position:

216

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

71.6

38.5

Major BPS

74.2

0.6

0.9

75.7

Major PPT

67.4

0.39

1.1

63.1

42.2

Minor 5ss

39.9

-1.1

2.8

52.3

44.5

Minor BPS

48.5

-0.1

1.7

59.97

39.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018995

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022223

17841995 - 17857667

15673