Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_6_17893107_17895696_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17893107 - 17895696

Intron Length:

2590

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTGTG

5'SS Class:

major

3'SS Sequence:

GTTTTTCCCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTAACAT

U12 Branch Point Sequence:

ACAACAGTAACA

Flanking Amino Acid:

EPPPPPPPEPESDDEDGLPK

Intron Amino Acid Position:

366

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.7

0.58

1.1

69.5

41.3

Major BPS

53.2

0.08

1.3

63.4

42.8

Major PPT

82.3

0.73

0.8

76.9

Minor 5ss

39.2

-1.2

3.4

59.1

45.3

Minor BPS

45.4

-0.3

2.2

56.76

41.9

Associated Gene:

Gene:

ANTXRL

Ensembl Gene ID:

ENSAPLG00000002292

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038840

17874013 - 17925049

51037

ENSAPLT00000028455

17893105 - 17925787

32683

ENSAPLT00000002466

17884964 - 17924996

40033