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Intron Name: Anas_platyrhynchos_platyrhynchos_6_17897014_17901290_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17897014 - 17901290

Intron Length:

4277

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTAAGTAAT

5'SS Class:

major

3'SS Sequence:

TCTTTTTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAATCAT

U12 Branch Point Sequence:

TAACTCAGAAGC

Flanking Amino Acid:

SSVSITSTQCLTGTILFIAL

Intron Amino Acid Position:

321

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

1.1

34.8

Major BPS

68.1

0.45

1.1

69.7

35.6

Major PPT

95.2

1.02

0.5

91.6

19.5

Minor 5ss

39.4

-1.2

2.9

52.2

44.4

Minor BPS

42.8

-0.5

1.9

51.9

38.2

Associated Gene:

Gene:

ANTXRL

Ensembl Gene ID:

ENSAPLG00000002292

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002466

17884964 - 17924996

40033

ENSAPLT00000038840

17874013 - 17925049

51037