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Intron Name: Anas_platyrhynchos_platyrhynchos_6_17954171_17957017_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

17954171 - 17957017

Intron Length:

2847

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAACCTT

5'SS Class:

strong_major

3'SS Sequence:

AATTTCTGAAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

GTTTTATTAATA

Flanking Amino Acid:

VHTDALIIDMRYNIGGDTTS

Intron Amino Acid Position:

1492

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

75.1

41.1

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

55.9

0.13

1.2

57.5

41.6

Minor 5ss

43.2

-0.8

3.3

64.9

46.4

Minor BPS

68.4

0.57

1.5

76.99

33.5

Associated Gene:

Gene:

RBP3

Ensembl Gene ID:

ENSAPLG00000002097

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002150

17951499 - 17981884

30386