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Intron Name: Anas_platyrhynchos_platyrhynchos_6_18152893_18154061_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18152893 - 18154061

Intron Length:

1169

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGACAA

5'SS Class:

strong_major

3'SS Sequence:

GTTATTTTGATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAC

U12 Branch Point Sequence:

TTTTTGTTATTT

Flanking Amino Acid:

VLPEIEQCVPTPAPSPVKEF

Intron Amino Acid Position:

1229

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

68.2

38.6

Major BPS

77.9

0.69

78.3

31.3

Major PPT

0.49

68.9

41.9

Minor 5ss

31.8

-2.1

3.1

40.2

45.4

Minor BPS

56.6

0.28

2.2

82.89

39.2

Associated Gene:

Gene:

FRMPD2

Ensembl Gene ID:

ENSAPLG00000001314

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001453

18141492 - 18188319

46828