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© 2019-2022 Kanadia Lab,
PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_6_18160260_18160772_R

Intron Information:

Intron Rank:
20
Intron Class:
major
Intron Phase:
1
Intron Coordinates:
18160260 - 18160772
Intron Length:
513

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AAG|GTATAAAGG
5'SS Class:
major
3'SS Sequence:
TATGGTTTTGCAG|A
3'SS Class:
major_PPT
U2 Branch Point Sequence:
CATTCAT
U12 Branch Point Sequence:
CATTCATCAATG
Flanking Amino Acid:
EVELIISQPKDIYEEGLNEE
Intron Amino Acid Position:
901

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
72.3
0.53
1
61.4
43.1
Major BPS
79.8
0.74
0.9
81.3
29.9
Major PPT
79.7
0.67
0.9
73.2
41.7
Minor 5ss
38.3
-1.3
2.9
49
46.8
Minor BPS
50.3
-0.1
1.9
58.18
43.4

Associated Gene:

Gene:
FRMPD2
Ensembl Gene ID:
ENSAPLG00000001314
Chromosome:
6

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000001453
18141492 - 18188319
46828