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Intron Name: Anas_platyrhynchos_platyrhynchos_6_18243570_18245576_F

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

18243570 - 18245576

Intron Length:

2007

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATC|GTATCCTTA

5'SS Class:

strong_minor

3'SS Sequence:

TGTGAAACCTTAG|A

3'SS Class:

strong_BPS

U2 Branch Point Sequence:

TTCTTAG

U12 Branch Point Sequence:

TTTTTCTTAGCT

Flanking Amino Acid:

KGGVLFPGTDHIDQWNKVIE

Intron Amino Acid Position:

230

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

48.1

-0.1

1.4

51.2

42.3

Major BPS

67.5

0.43

1.5

65.7

43.2

Major PPT

57.8

0.18

41.4

Minor 5ss

86.9

1.24

1.2

81.6

32.5

Minor BPS

80.2

1.03

1.4

95.66

30.6

Associated Gene:

Gene:

MAPK8

Ensembl Gene ID:

ENSAPLG00000016448

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018731

18229414 - 18252195

22782