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Intron Name: Anas_platyrhynchos_platyrhynchos_6_18246408_18247364_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18246408 - 18247364

Intron Length:

957

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTTCT

5'SS Class:

major

3'SS Sequence:

TTTTGTTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

ATTACTTTATCA

Flanking Amino Acid:

VWYDPSEAEAPPPKIPDKQL

Intron Amino Acid Position:

333

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.61

1.1

74.8

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

91.8

0.94

0.7

84.6

Minor 5ss

45.8

-0.4

2.8

69.7

40.4

Minor BPS

64.5

0.45

1.6

74.49

Associated Gene:

Gene:

MAPK8

Ensembl Gene ID:

ENSAPLG00000016448

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018731

18229414 - 18252195

22782

ENSAPLT00000017167

18229414 - 18252195

22782