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Intron Name: Anas_platyrhynchos_platyrhynchos_6_18271769_18277281_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18271769 - 18277281

Intron Length:

5513

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

TCCTGTCCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

ATATCAATACGT

Flanking Amino Acid:

GQLLSKDEGEGTQELVKQVK

Intron Amino Acid Position:

291

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

1.2

76.2

39.9

Major BPS

79.2

0.73

75.3

39.4

Major PPT

75.6

0.58

0.8

72.9

Minor 5ss

29.8

-2.3

3.1

41.5

44.9

Minor BPS

43.2

-0.4

2.3

65.6

44.3

Associated Gene:

Gene:

ARHGAP22

Ensembl Gene ID:

ENSAPLG00000016416

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038455

18260713 - 18403291

142579

ENSAPLT00000017133

18261056 - 18401658

140603