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Intron Name: Anas_platyrhynchos_platyrhynchos_6_18430487_18431002_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18430487 - 18431002

Intron Length:

516

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTGGTTT

5'SS Class:

major

3'SS Sequence:

GTTTTCCCTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTGT

U12 Branch Point Sequence:

TTTTCCCTACAG

Flanking Amino Acid:

QTRNSILYLQAVDCIKIAIQ

Intron Amino Acid Position:

266

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.4

0.53

1.2

73.3

37.9

Major BPS

38.1

-0.7

4.3

71.7

44.6

Major PPT

0.76

0.8

77.4

31.5

Minor 5ss

45.1

-0.5

3.1

64.8

46.5

Minor BPS

53.3

-0

2.1

69.58

43.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016398

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017115

18422873 - 18469263

46391