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Intron Name: Anas_platyrhynchos_platyrhynchos_6_18460583_18462301_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18460583 - 18462301

Intron Length:

1719

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACATTC

5'SS Class:

major

3'SS Sequence:

TTCTCTCTGGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

TTGACCAAAACC

Flanking Amino Acid:

QGHFNTRDVLRVALFLVYTL

Intron Amino Acid Position:

1525

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

1.1

75.9

34.8

Major BPS

87.6

0.93

0.9

89.3

Major PPT

67.7

0.4

1.1

71.4

33.4

Minor 5ss

-0.2

2.9

68.1

42.9

Minor BPS

51.2

0.02

68.14

43.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016398

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017115

18422873 - 18469263

46391