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Intron Name: Anas_platyrhynchos_platyrhynchos_6_18542038_18542679_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18542038 - 18542679

Intron Length:

642

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAGGTGGA

5'SS Class:

major

3'SS Sequence:

CTCACTGACACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAC

U12 Branch Point Sequence:

TTTTCCCTCACT

Flanking Amino Acid:

ITGSTDGVVRLWKTEYTDSP

Intron Amino Acid Position:

234

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.59

1.1

63.3

43.4

Major BPS

77.9

0.69

78.3

31.3

Major PPT

62.9

0.29

56.5

37.8

Minor 5ss

30.2

-2.3

3.3

31.3

42.9

Minor BPS

68.8

0.67

2.1

92.91

35.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028673

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043887

18531543 - 18542796

11254