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Intron Name: Anas_platyrhynchos_platyrhynchos_6_18566782_18567629_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18566782 - 18567629

Intron Length:

848

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGAAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTATTTCCACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

GACCCCTTAATA

Flanking Amino Acid:

VEQPPAIPAKAPIANNFPKP

Intron Amino Acid Position:

263

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

78.7

29.9

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

84.9

0.79

0.8

80.3

31.7

Minor 5ss

38.9

-1.3

2.8

48.3

47.4

Minor BPS

67.9

0.56

1.3

67.04

39.2

Associated Gene:

Gene:

VSTM4

Ensembl Gene ID:

ENSAPLG00000016366

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044138

18565388 - 18589843

24456

ENSAPLT00000018028

18556074 - 18589020

32947

ENSAPLT00000017080

18509277 - 18584612

75336