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Intron Name: Anas_platyrhynchos_platyrhynchos_6_18659931_18661691_R

Intron Information:

Intron Rank:

136944

Intron Class:

major

Intron Phase:

Intron Coordinates:

18659931 - 18661691

Intron Length:

1761

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTTGG

5'SS Class:

strong_major

3'SS Sequence:

TTTGTGTCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GATTCAA

U12 Branch Point Sequence:

TCAAGCTTGAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

72.5

39.9

Major BPS

65.2

0.38

1.2

69.6

37.5

Major PPT

82.3

0.73

0.9

73.6

41.8

Minor 5ss

41.3

-1

2.8

49.6

Minor BPS

47.3

-0.2

1.9

56.91

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021166

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040462

18653373 - 18661745

8373