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Intron Name: Anas_platyrhynchos_platyrhynchos_6_18709059_18719790_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
5UTR

Intron Coordinates:
18709059 - 18719790

Intron Length:
10732

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTGAGTGAG

5'SS Class:
strong_major

3'SS Sequence:
TCCCTGTCACCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TCCTCAC

U12 Branch Point Sequence:
GGCTCCTCACCT

Flanking Amino Acid:
5UTR

Intron Amino Acid Position:
5UTR

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
90.5
0.96
0.8
77.5
32.9

Major BPS
72.4
0.56
1
73.5
32.5

Major PPT
69.2
0.43
0.9
61.9
38.7

Minor 5ss
26.6
-2.7
3
30.5
43.3

Minor BPS
53.1
0.18
1.9
69.89
46.4

Associated Gene:

Gene:
DRGX

Ensembl Gene ID:

Chromosome:
6

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

18693620 - 18720290
26671