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Intron Name: Anas_platyrhynchos_platyrhynchos_6_18737175_18737520_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18737175 - 18737520

Intron Length:

346

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTTCA

5'SS Class:

strong_major

3'SS Sequence:

TTTGCATGTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

ATAGAGTTAATT

Flanking Amino Acid:

SGLSGAPAGTKSRFGQKRNL

Intron Amino Acid Position:

1345

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

80.5

27.6

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

72.3

0.5

70.5

40.2

Minor 5ss

42.2

-0.9

2.7

50.9

39.6

Minor BPS

47.5

-0.1

2.2

68.02

Associated Gene:

Gene:

ERCC6

Ensembl Gene ID:

ENSAPLG00000016335

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022361

18736301 - 18782178

45878

ENSAPLT00000017049

18736301 - 18782178

45878

ENSAPLT00000024176

18736301 - 18782178

45878