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Intron Name: Anas_platyrhynchos_platyrhynchos_6_18746788_18748101_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18746788 - 18748101

Intron Length:

1314

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

CTTCCGTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GAATCAA

U12 Branch Point Sequence:

AGAATCAAAGTA

Flanking Amino Acid:

GGYSNASPVQVKTAYKCACV

Intron Amino Acid Position:

734

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.6

1.07

0.7

84.1

26.6

Major BPS

53.5

0.09

1.2

38.9

Major PPT

83.1

0.75

0.8

80.1

31.9

Minor 5ss

-1.9

3.1

41.6

Minor BPS

-0.9

1.8

40.84

32.5

Associated Gene:

Gene:

ERCC6

Ensembl Gene ID:

ENSAPLG00000016335

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022361

18736301 - 18782178

45878

ENSAPLT00000017049

18736301 - 18782178

45878