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Intron Name: Anas_platyrhynchos_platyrhynchos_6_18759061_18763543_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18759061 - 18763543

Intron Length:

4483

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTATGTATT

5'SS Class:

strong_major

3'SS Sequence:

TCCTTGTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATCAA

U12 Branch Point Sequence:

TATTATCAAACA

Flanking Amino Acid:

VPGFLFKKLFKYQQTGVRWL

Intron Amino Acid Position:

519

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

0.9

86.3

Major BPS

0.72

80.3

31.7

Major PPT

81.5

0.71

0.8

80.2

31.9

Minor 5ss

49.5

-0

2.5

68.8

35.6

Minor BPS

47.6

-0.1

2.1

66.24

39.9

Associated Gene:

Gene:

ERCC6

Ensembl Gene ID:

ENSAPLG00000016335

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024176

18736301 - 18782178

45878

ENSAPLT00000022361

18736301 - 18782178

45878

ENSAPLT00000017049

18736301 - 18782178

45878