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Intron Name: Anas_platyrhynchos_platyrhynchos_6_18774137_18776062_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18774137 - 18776062

Intron Length:

1926

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGGGAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTGTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAC

U12 Branch Point Sequence:

ATGTTCTGACTT

Flanking Amino Acid:

ISEIEFEDDEEPGPSSLGSM

Intron Amino Acid Position:

236

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

65.7

40.1

Major BPS

81.4

0.78

0.9

71.3

36.7

Major PPT

93.1

0.97

0.7

92.3

26.6

Minor 5ss

34.7

-1.7

3.5

45.4

49.7

Minor BPS

52.4

0.15

1.7

70.44

41.1

Associated Gene:

Gene:

ERCC6

Ensembl Gene ID:

ENSAPLG00000016335

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024176

18736301 - 18782178

45878

ENSAPLT00000022361

18736301 - 18782178

45878

ENSAPLT00000017049

18736301 - 18782178

45878