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© 2019-2022 Kanadia Lab,
PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_6_19201999_19203029_R

Intron Information:

Intron Rank:
2
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
19201999 - 19203029
Intron Length:
1031

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AAG|GTAAGTGGC
5'SS Class:
strong_major
3'SS Sequence:
ATTTTGTATTTAG|A
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TACTAAT
U12 Branch Point Sequence:
TATTTTGTATTT
Flanking Amino Acid:
RNADVNLRNKKDRTCLHYAV
Intron Amino Acid Position:
72

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
94.3
1.04
0.8
79.7
35.4
Major BPS
86.7
0.91
0.7
84.2
21.8
Major PPT
76.2
0.59
0.9
74.8
39.7
Minor 5ss
33
-1.9
3.2
43.9
43.9
Minor BPS
48.2
-0
2.2
71.82
40.2

Associated Gene:

Gene:
ANKRD22
Ensembl Gene ID:
ENSAPLG00000001838
Chromosome:
6

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000001890
19199521 - 19208033
8513