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Intron Name: Anas_platyrhynchos_platyrhynchos_6_19217947_19218767_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19217947 - 19218767

Intron Length:

821

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGTGACAT

5'SS Class:

major

3'SS Sequence:

TCTTCTGTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATAACAT

U12 Branch Point Sequence:

CTTGCTATAACA

Flanking Amino Acid:

IPSGRNMQNTGKKPAVLLHH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

0.9

69.4

36.6

Major BPS

62.2

0.3

1.1

69.4

35.8

Major PPT

86.1

0.81

0.8

84.1

30.8

Minor 5ss

34.3

-1.8

3.1

46.9

48.4

Minor BPS

59.8

0.3

1.8

71.7

40.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017704

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026541

19213349 - 19225522

12174

ENSAPLT00000001940

19213349 - 19226505

13157