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Intron Name: Anas_platyrhynchos_platyrhynchos_6_19218967_19219699_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19218967 - 19219699

Intron Length:

733

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTCTGT

5'SS Class:

major

3'SS Sequence:

TTCTCCTTTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTACAT

U12 Branch Point Sequence:

CCTCTGTCAGCT

Flanking Amino Acid:

KPCQKEFWQFSFHEIGIYDL

Intron Amino Acid Position:

149

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.7

0.47

1.1

62.7

44.3

Major BPS

58.8

0.22

1.2

66.8

39.9

Major PPT

85.8

0.8

0.6

84.8

22.8

Minor 5ss

44.6

-0.6

3.1

65.7

45.4

Minor BPS

40.4

-0.6

2.3

56.74

45.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017704

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001940

19213349 - 19226505

13157

ENSAPLT00000026541

19213349 - 19225522

12174