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Intron Name: Anas_platyrhynchos_platyrhynchos_6_19233807_19241696_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

19233807 - 19241696

Intron Length:

7890

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAATCATG

5'SS Class:

major

3'SS Sequence:

CTATTTCTTCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

GTATTTTTAATC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.2

0.48

1.1

68.3

42.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

80.8

0.69

0.8

73.7

36.7

Minor 5ss

44.8

-0.6

2.8

58.1

40.5

Minor BPS

0.61

1.1

71.24

Associated Gene:

Gene:

STAMBPL1

Ensembl Gene ID:

ENSAPLG00000002723

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038823

19233713 - 19253594

19882