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Intron Name: Anas_platyrhynchos_platyrhynchos_6_19241896_19242749_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19241896 - 19242749

Intron Length:

854

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTACGTATT

5'SS Class:

strong_major

3'SS Sequence:

TGTTCTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTAAT

U12 Branch Point Sequence:

TCCTTGCTAATC

Flanking Amino Acid:

MEQPFSISSLKKLVAIPDHT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

83.7

34.5

Major BPS

79.3

0.73

1.1

77.9

34.9

Major PPT

90.2

0.9

0.7

88.4

28.7

Minor 5ss

40.7

-1

3.1

56.6

42.9

Minor BPS

45.5

-0.3

2.3

57.62

42.1

Associated Gene:

Gene:

STAMBPL1

Ensembl Gene ID:

ENSAPLG00000002723

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038823

19233713 - 19253594

19882

ENSAPLT00000002766

19241697 - 19253131

11435