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Intron Name: Anas_platyrhynchos_platyrhynchos_6_19242968_19244138_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19242968 - 19244138

Intron Length:

1171

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTAAGAAAC

5'SS Class:

major

3'SS Sequence:

TTTAATTTTCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

TGCTGTTTAATT

Flanking Amino Acid:

NAFVFYNKFITLFVEKLPSH

Intron Amino Acid Position:

100

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.7

0.61

1.3

75.1

35.1

Major BPS

81.8

0.79

1.1

34.5

Major PPT

81.4

0.71

0.8

73.9

41.2

Minor 5ss

35.1

-1.7

43.2

37.2

Minor BPS

62.1

0.46

1.8

75.88

41.7

Associated Gene:

Gene:

STAMBPL1

Ensembl Gene ID:

ENSAPLG00000002723

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038823

19233713 - 19253594

19882

ENSAPLT00000002766

19241697 - 19253131

11435