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Intron Name: Anas_platyrhynchos_platyrhynchos_6_19244955_19246310_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19244955 - 19246310

Intron Length:

1356

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTTCC

5'SS Class:

strong_major

3'SS Sequence:

GCATATGTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATAAA

U12 Branch Point Sequence:

TTTTGCATATGT

Flanking Amino Acid:

LEYQEYMQNKNKCKTEFLKK

Intron Amino Acid Position:

158

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

78.6

29.6

Major BPS

69.8

0.49

70.3

31.8

Major PPT

69.9

0.45

65.3

Minor 5ss

43.2

-0.7

2.7

54.4

36.6

Minor BPS

46.5

-0.1

2.4

76.59

45.8

Associated Gene:

Gene:

STAMBPL1

Ensembl Gene ID:

ENSAPLG00000002723

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002766

19241697 - 19253131

11435

ENSAPLT00000038823

19233713 - 19253594

19882