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Intron Name: Anas_platyrhynchos_platyrhynchos_6_19247407_19248308_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19247407 - 19248308

Intron Length:

902

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTACAGTTC

5'SS Class:

major

3'SS Sequence:

ATTTGTTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTCAA

U12 Branch Point Sequence:

GTTATCTCAACA

Flanking Amino Acid:

ETCGILCGKLTHNEFTITHV

Intron Amino Acid Position:

315

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.4

0.34

1.1

60.1

39.7

Major BPS

76.9

0.67

0.8

77.7

26.1

Major PPT

86.4

0.82

0.8

80.4

36.6

Minor 5ss

39.7

-1.2

3.6

55.2

44.7

Minor BPS

63.5

0.42

1.6

73.23

38.1

Associated Gene:

Gene:

STAMBPL1

Ensembl Gene ID:

ENSAPLG00000002723

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038823

19233713 - 19253594

19882

ENSAPLT00000002766

19241697 - 19253131

11435