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Intron Name: Anas_platyrhynchos_platyrhynchos_6_19257579_19257819_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19257579 - 19257819

Intron Length:

241

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGAACA

5'SS Class:

strong_major

3'SS Sequence:

ATCATCTCAACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

ATCATCTCAACA

Flanking Amino Acid:

TERGYSFVTTAEREIVRDIK

Intron Amino Acid Position:

195

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

76.1

32.7

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

68.4

0.41

62.7

37.8

Minor 5ss

33.9

-1.8

2.9

38.9

40.1

Minor BPS

58.1

0.25

1.6

66.5

39.8

Associated Gene:

Gene:

ACTA2

Ensembl Gene ID:

ENSAPLG00000002915

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006300

19248480 - 19260821

12342

ENSAPLT00000002970

19255192 - 19263452

8261

ENSAPLT00000021302

19255354 - 19264070

8717