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Intron Name: Anas_platyrhynchos_platyrhynchos_6_19260822_19263401_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

19260822 - 19263401

Intron Length:

2580

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

GCTGTTTTTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATTTTCCTAATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

71.1

40.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

77.9

0.63

0.9

72.1

Minor 5ss

32.6

-2

3.1

35.3

41.4

Minor BPS

0.71

1.6

86.76

32.5

Associated Gene:

Gene:

ACTA2

Ensembl Gene ID:

ENSAPLG00000002915

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021302

19255354 - 19264070

8717

ENSAPLT00000002970

19255192 - 19263452

8261