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Intron Name: Anas_platyrhynchos_platyrhynchos_6_19367500_19368588_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19367500 - 19368588

Intron Length:

1089

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCTTC

5'SS Class:

strong_major

3'SS Sequence:

TGTTGATTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

TATTTGTTGATT

Flanking Amino Acid:

SVQNMIHWTQAVKTGELKAY

Intron Amino Acid Position:

291

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.97

0.8

82.3

32.2

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

75.5

0.57

0.9

66.7

44.2

Minor 5ss

48.4

-0.1

2.8

67.4

Minor BPS

0.33

2.1

78.98

37.7

Associated Gene:

Gene:

LIPA

Ensembl Gene ID:

ENSAPLG00000018116

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037938

19364753 - 19377800

13048