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Intron Name: Anas_platyrhynchos_platyrhynchos_6_19371524_19372078_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19371524 - 19372078

Intron Length:

555

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTATGTGAA

5'SS Class:

major

3'SS Sequence:

GTATTATTTACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAT

U12 Branch Point Sequence:

TTATTGATAATT

Flanking Amino Acid:

YVGHSQGTTMAFIAFSTLPQ

Intron Amino Acid Position:

172

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

70.3

35.9

Major BPS

88.6

0.96

0.8

77.7

37.1

Major PPT

79.9

0.67

0.9

73.2

Minor 5ss

37.6

-1.4

3.1

39.8

46.2

Minor BPS

50.4

0.09

2.2

77.18

39.6

Associated Gene:

Gene:

LIPA

Ensembl Gene ID:

ENSAPLG00000018116

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037938

19364753 - 19377800

13048