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Intron Name: Anas_platyrhynchos_platyrhynchos_6_19376085_19377492_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19376085 - 19377492

Intron Length:

1408

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATC|GTGAGTCCC

5'SS Class:

major

3'SS Sequence:

TTTCTTTCTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTCAA

U12 Branch Point Sequence:

CTGACTTCAAGG

Flanking Amino Acid:

NVDPETNMNISQIIVFRGYP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.9

0.35

1.3

58.5

40.7

Major BPS

69.4

0.48

71.6

33.8

Major PPT

93.4

0.98

0.5

92.6

17.4

Minor 5ss

31.6

-2.1

2.8

37.7

33.3

Minor BPS

45.2

-0.5

1.9

47.66

45.8

Associated Gene:

Gene:

LIPA

Ensembl Gene ID:

ENSAPLG00000018116

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037938

19364753 - 19377800

13048