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Intron Name: Anas_platyrhynchos_platyrhynchos_6_19584075_19584377_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19584075 - 19584377

Intron Length:

303

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTTCT

5'SS Class:

strong_major

3'SS Sequence:

GTTCTCTCTTGAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTTAT

U12 Branch Point Sequence:

ATAACTTTATTT

Flanking Amino Acid:

HVIDFKEKKQEIAKPVSPSE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

83.3

Major BPS

75.1

0.62

65.6

Major PPT

0.27

1.7

73.7

36.9

Minor 5ss

42.9

-0.8

2.8

44.3

Minor BPS

57.2

0.31

1.6

71.88

39.3

Associated Gene:

Gene:

RPP30

Ensembl Gene ID:

ENSAPLG00000009959

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042896

19582259 - 19597317

15059

ENSAPLT00000010374

19582259 - 19601089

18831