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Intron Name: Anas_platyrhynchos_platyrhynchos_6_19584435_19585122_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19584435 - 19585122

Intron Length:

688

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTATGTTTA

5'SS Class:

major

3'SS Sequence:

TTTTCCTTCGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

AAGTCTTCAATT

Flanking Amino Acid:

ELFPSLPIVQGTSKQLKVLT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.71

0.9

79.5

29.4

Major BPS

87.3

0.93

0.8

36.5

Major PPT

84.4

0.77

0.6

81.2

23.8

Minor 5ss

55.6

0.19

2.3

66.5

Minor BPS

60.9

0.42

1.5

71.71

39.6

Associated Gene:

Gene:

RPP30

Ensembl Gene ID:

ENSAPLG00000009959

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042896

19582259 - 19597317

15059

ENSAPLT00000010374

19582259 - 19601089

18831