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Intron Name: Anas_platyrhynchos_platyrhynchos_6_19585198_19585731_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19585198 - 19585731

Intron Length:

534

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

CCTCCCTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAGTAAT

U12 Branch Point Sequence:

AAAGCAGTAATT

Flanking Amino Acid:

VSDPSHCNLLRSTSSNIRLY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.2

0.97

0.8

88.9

24.9

Major BPS

64.3

0.36

1.2

65.3

38.6

Major PPT

81.9

0.72

0.7

75.9

Minor 5ss

39.5

-1.2

2.8

48.3

41.8

Minor BPS

44.6

-0.3

2.2

61.61

42.2

Associated Gene:

Gene:

RPP30

Ensembl Gene ID:

ENSAPLG00000009959

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042896

19582259 - 19597317

15059

ENSAPLT00000010374

19582259 - 19601089

18831