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Intron Name: Anas_platyrhynchos_platyrhynchos_6_19585804_19590988_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19585804 - 19590988

Intron Length:

5185

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTACA

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTGCTATAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TATCTATTAATC

Flanking Amino Acid:

VFPKTEKLFHIACTTLDVDI

Intron Amino Acid Position:

115

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

82.7

29.2

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

80.8

0.69

0.8

76.5

32.3

Minor 5ss

38.4

-1.3

2.7

48.5

40.3

Minor BPS

61.1

0.33

1.5

70.12

34.6

Associated Gene:

Gene:

RPP30

Ensembl Gene ID:

ENSAPLG00000009959

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010374

19582259 - 19601089

18831

ENSAPLT00000042896

19582259 - 19597317

15059