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Intron Name: Anas_platyrhynchos_platyrhynchos_6_19596798_19597214_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19596798 - 19597214

Intron Length:

417

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTGTTCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATCCAA

U12 Branch Point Sequence:

ACATATCCAACC

Flanking Amino Acid:

NIVISSAAERPLELRGPYDV

Intron Amino Acid Position:

194

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.7

0.84

75.3

40.8

Major BPS

60.3

0.26

1.2

70.7

35.5

Major PPT

80.6

0.69

0.9

73.5

41.9

Minor 5ss

36.4

-1.5

2.9

43.6

43.3

Minor BPS

43.4

-0.5

1.9

51.8

38.8

Associated Gene:

Gene:

RPP30

Ensembl Gene ID:

ENSAPLG00000009959

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042896

19582259 - 19597317

15059

ENSAPLT00000010374

19582259 - 19601089

18831