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Intron Name: Anas_platyrhynchos_platyrhynchos_6_19776353_19779265_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19776353 - 19779265

Intron Length:

2913

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGAGAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTAATAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

TTTTTTTTAATA

Flanking Amino Acid:

TQLVIPNIKNVRDLPPICLD

Intron Amino Acid Position:

128

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

73.1

31.1

Major BPS

87.3

0.93

0.8

36.5

Major PPT

73.1

0.52

1.1

81.1

34.5

Minor 5ss

29.9

-2.3

3.3

42.5

Minor BPS

82.2

1.01

0.9

86.33

25.3

Associated Gene:

Gene:

HECTD2

Ensembl Gene ID:

ENSAPLG00000010621

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028271

19770812 - 19803216

32405

ENSAPLT00000011065

19770812 - 19803216

32405

ENSAPLT00000039584

19775494 - 19803216

27723

ENSAPLT00000032346

19770812 - 19803216

32405